Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM40794.1 | SEM40824.1 | SAMN04488103_10160 | SAMN04488103_10161 | Predicted dehydrogenase. | Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). | 0.635 |
SEM40794.1 | SEM40855.1 | SAMN04488103_10160 | SAMN04488103_10162 | Predicted dehydrogenase. | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.634 |
SEM40794.1 | SEM40885.1 | SAMN04488103_10160 | SAMN04488103_10163 | Predicted dehydrogenase. | Xylose-binding protein. | 0.458 |
SEM40794.1 | SEM40916.1 | SAMN04488103_10160 | SAMN04488103_10164 | Predicted dehydrogenase. | 2-keto-myo-inositol isomerase. | 0.447 |
SEM40824.1 | SEM40794.1 | SAMN04488103_10161 | SAMN04488103_10160 | Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). | Predicted dehydrogenase. | 0.635 |
SEM40824.1 | SEM40855.1 | SAMN04488103_10161 | SAMN04488103_10162 | Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.972 |
SEM40824.1 | SEM40885.1 | SAMN04488103_10161 | SAMN04488103_10163 | Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). | Xylose-binding protein. | 0.933 |
SEM40824.1 | SEM43115.1 | SAMN04488103_10161 | SAMN04488103_101132 | Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). | Multiple monosaccharide ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family. | 0.478 |
SEM40824.1 | SEM47172.1 | SAMN04488103_10161 | SAMN04488103_101242 | Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.886 |
SEM40824.1 | SEM47249.1 | SAMN04488103_10161 | SAMN04488103_101244 | Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | 0.683 |
SEM40824.1 | SEN32593.1 | SAMN04488103_10161 | SAMN04488103_104198 | Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). | Repeat domain-containing protein. | 0.769 |
SEM40855.1 | SEM40794.1 | SAMN04488103_10162 | SAMN04488103_10160 | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Predicted dehydrogenase. | 0.634 |
SEM40855.1 | SEM40824.1 | SAMN04488103_10162 | SAMN04488103_10161 | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). | 0.972 |
SEM40855.1 | SEM40885.1 | SAMN04488103_10162 | SAMN04488103_10163 | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Xylose-binding protein. | 0.965 |
SEM40855.1 | SEM47136.1 | SAMN04488103_10162 | SAMN04488103_101241 | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). | 0.884 |
SEM40855.1 | SEM47249.1 | SAMN04488103_10162 | SAMN04488103_101244 | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain. | 0.710 |
SEM40855.1 | SEN32593.1 | SAMN04488103_10162 | SAMN04488103_104198 | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | Repeat domain-containing protein. | 0.801 |
SEM40855.1 | xylA | SAMN04488103_10162 | SAMN04488103_101239 | D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. | D-xylose isomerase; Belongs to the xylose isomerase family. | 0.457 |
SEM40885.1 | SEM40794.1 | SAMN04488103_10163 | SAMN04488103_10160 | Xylose-binding protein. | Predicted dehydrogenase. | 0.458 |
SEM40885.1 | SEM40824.1 | SAMN04488103_10163 | SAMN04488103_10161 | Xylose-binding protein. | Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). | 0.933 |
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