STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM88869.1Protein of unknown function. (99 aa)    
Predicted Functional Partners:
SEM88982.1
Protein of unknown function.
 
    0.938
SEM88947.1
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
 
  
 0.929
SEM88905.1
Sulfite reductase (NADPH) hemoprotein beta-component.
 
  
 0.917
SEM89014.1
ferredoxin--NADP+ reductase.
       0.773
SEM92292.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase; Belongs to the precorrin methyltransferase family.
  
  
 0.714
SEN15755.1
Hypothetical protein.
  
     0.696
SEM88836.1
Lrp/AsnC family transcriptional regulator.
 
     0.583
SEN15224.1
Hypothetical protein.
  
     0.566
SEN45522.1
Hypothetical protein.
  
     0.557
SEN71548.1
Rod shape-determining protein MreD.
  
     0.555
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.