STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN08348.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
SEN08311.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.676
SEN08398.1
Hypothetical protein; Belongs to the BI1 family.
       0.582
SEM79485.1
Uncharacterized membrane protein YckC, RDD family.
  
     0.464
SEM88869.1
Protein of unknown function.
  
     0.452
SEM76168.1
LuxR family transcriptional regulator.
  
     0.417
SEN15755.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.