STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN08860.1Iron complex transport system ATP-binding protein. (252 aa)    
Predicted Functional Partners:
SEN08775.1
Iron complex transport system substrate-binding protein.
 
 0.999
SEN08821.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.999
SEN08740.1
Vitamin B12 transporter.
 
   
 0.943
SEN08900.1
Adenosylcobinamide hydrolase.
 
     0.941
SEN08938.1
Protein TonB.
 
  
 0.855
SEN09216.1
Zinc transport system permease protein.
   
 0.633
SEN31866.1
cob(I)alamin adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
   
  0.626
SEM93956.1
ABC transporter.
  
     0.586
SEN59445.1
Zinc-uptake complex component A, substrate-binding.
    
 0.578
SEN32390.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
  
  
 0.577
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.