STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN09047.1L-ascorbate metabolism protein UlaG, beta-lactamase superfamily; Belongs to the UPF0173 family. (231 aa)    
Predicted Functional Partners:
SEN09013.1
Hypothetical protein.
       0.554
SEN14032.1
23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family.
     
 0.520
SEN14082.1
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
      
 0.508
SEN14134.1
Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.
      
 0.508
SEN84245.1
Acyl transferase domain-containing protein.
     
 0.504
gatC
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
       0.439
SEM60802.1
PTS IIA-like nitrogen-regulatory protein PtsN.
    
 0.425
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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