STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN71318.1Haem-NO-binding. (180 aa)    
Predicted Functional Partners:
SEN71281.1
Signal transduction histidine kinase.
    
 0.958
SEO25333.1
PAS domain S-box-containing protein.
    
 0.822
SEN82759.1
PAS domain S-box-containing protein.
    
 0.738
SEM57780.1
PAS fold-containing protein.
    
 0.723
SEN42001.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
    
 0.723
SEM38744.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
      0.617
SEM98672.1
Polyphosphate kinase 2, PA0141 family.
   
    0.610
SEN24278.1
Polyphosphate kinase 2, PA0141 family.
   
    0.610
SEN45125.1
Polyphosphate kinase 2, PA0141 family.
   
    0.610
SEM43953.1
PAS domain S-box-containing protein.
    
 0.600
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.