STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO00076.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (258 aa)    
Predicted Functional Partners:
SEN84245.1
Acyl transferase domain-containing protein.
  
 0.887
SEM60383.1
Glutamate synthase (NADPH) large subunit.
     
 0.722
SEM51686.1
Propane monooxygenase reductase subunit.
  
 0.675
SEN84318.1
Natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 0.673
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.653
SEO21675.1
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.596
lcdH
Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
  
 0.590
SEN46380.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.589
SEM43738.1
Ferredoxin-NADP reductase.
   
 0.584
SEN30640.1
Ferredoxin-NADP reductase.
   
 0.584
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.