STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO10368.1Uncharacterized domain 1-containing protein. (140 aa)    
Predicted Functional Partners:
SEO10399.1
Acyl-coenzyme A thioesterase PaaI, contains HGG motif.
  
0.991
SEO10429.1
Multidrug resistance protein, MATE family.
       0.867
SEO10336.1
Transcriptional regulator, MerR family.
  
    0.735
SEM43738.1
Ferredoxin-NADP reductase.
  
 
  0.578
SEN30640.1
Ferredoxin-NADP reductase.
  
 
  0.578
SEO04377.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
  
 
  0.578
SEO16839.1
Ferredoxin-NADP reductase.
  
 
  0.578
SEO10298.1
Transcriptional regulator, MerR family.
  
    0.517
SEO10079.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.505
SEN60630.1
Hypothetical protein.
  
     0.416
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.