STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO32573.1Phage gp6-like head-tail connector protein. (100 aa)    
Predicted Functional Partners:
SEO32448.1
Head-tail adaptor.
  
   0.880
SEO32536.1
Phage protein, HK97 gp10 family.
       0.778
SEO32414.1
Phage terminase, small subunit, putative, P27 family.
       0.777
SEO32344.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
       0.776
SEO32498.1
Protein of unknown function.
       0.774
SEO32382.1
Hypothetical protein.
       0.773
SEO32316.1
Phage tail tape measure protein, lambda family.
       0.757
SEN35397.1
Phage major tail protein, TP901-1 family.
  
   0.549
SEN80776.1
Lysophospholipase L1.
   
  0.504
SEN81297.1
GDSL-like Lipase/Acylhydrolase family protein.
   
  0.504
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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