STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO33442.1Hypothetical protein. (239 aa)    
Predicted Functional Partners:
SEM42136.1
Sulfur carrier protein.
  
 0.963
SEN99631.1
Molybdopterin synthase subunit MoaD.
  
 0.923
SEN99584.1
Molybdopterin synthase subunit MoaE.
  
 0.835
SEO33410.1
Nucleotidyltransferase domain-containing protein.
       0.779
SEO33374.1
Plasmid maintenance system antidote protein, XRE family.
       0.773
SEM80173.1
Cysteine desulfurase.
   
 0.772
SEO33339.1
Proteic killer suppression protein.
       0.723
SEN80868.1
Hypothetical protein.
    
 0.720
SEO06267.1
Hypothetical protein.
     
 0.695
thiC
Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.
  
  
 0.656
Your Current Organism:
Gemmobacter aquatilis
NCBI taxonomy Id: 933059
Other names: ATCC 49971, DSM 3857, G. aquatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.