STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067PEK1Uncharacterized protein. (531 aa)    
Predicted Functional Partners:
A0A067PVP5
RING-type domain-containing protein.
    
 0.880
A0A067QDB6
Uncharacterized protein.
    
 0.880
A0A067QMC6
Small nuclear ribonucleoprotein Sm D2.
    
 0.847
A0A067Q4H7
Small nuclear ribonucleoprotein Sm D3.
    
 0.841
A0A067PWV3
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.837
A0A067QF75
Sm domain-containing protein.
    
 0.832
A0A067QH63
Uncharacterized protein.
    
 0.804
A0A067QL73
Uncharacterized protein.
    
 0.804
A0A067PJN0
Sm domain-containing protein.
    
 0.793
A0A067QDP2
Sm domain-containing protein.
    
 0.793
Your Current Organism:
Jaapia argillacea
NCBI taxonomy Id: 933084
Other names: J. argillacea MUCL 33604, Jaapia argillacea MUCL 33604
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.