A0A067PU48 protein (Jaapia argillacea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A067PU48

DUF1708 domain-containing protein. (1309 aa)

Predicted Functional Partners:

A0A067PW76

0.916

A0A067PXX2

0.846

A0A067QC48

0.833

A0A067QDK8

0.833

A0A067QDX1

0.833

A0A067QBV1

0.826

A0A067QLY4

0.826

A0A067P454

0.812

A0A067PES3

0.812

A0A067PN33

0.812

Your Current Organism:

Jaapia argillacea

NCBI taxonomy Id: 933084
Other names: J. argillacea MUCL 33604, Jaapia argillacea MUCL 33604

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A067P454	A0A067PN33	Uncharacterized protein.	Uncharacterized protein.	0.696
A0A067P454	A0A067PU48	Uncharacterized protein.	DUF1708 domain-containing protein.	0.812
A0A067P454	A0A067PW76	Uncharacterized protein.	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	0.771
A0A067P454	A0A067PXX2	Uncharacterized protein.	Uncharacterized protein.	0.812
A0A067P454	A0A067QBV1	Uncharacterized protein.	Uncharacterized protein.	0.806
A0A067P454	A0A067QC48	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.741
A0A067P454	A0A067QDK8	Uncharacterized protein.	Uncharacterized protein.	0.741
A0A067P454	A0A067QDX1	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.741
A0A067P454	A0A067QLY4	Uncharacterized protein.	Uncharacterized protein.	0.811
A0A067PES3	A0A067PU48	Uncharacterized protein.	DUF1708 domain-containing protein.	0.812
A0A067PES3	A0A067PW76	Uncharacterized protein.	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	0.769
A0A067PES3	A0A067PXX2	Uncharacterized protein.	Uncharacterized protein.	0.834
A0A067PES3	A0A067QBV1	Uncharacterized protein.	Uncharacterized protein.	0.806
A0A067PES3	A0A067QC48	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.710
A0A067PES3	A0A067QDK8	Uncharacterized protein.	Uncharacterized protein.	0.710
A0A067PES3	A0A067QDX1	Uncharacterized protein.	Uncharacterized protein; Belongs to the actin family.	0.710
A0A067PES3	A0A067QLY4	Uncharacterized protein.	Uncharacterized protein.	0.833
A0A067PN33	A0A067P454	Uncharacterized protein.	Uncharacterized protein.	0.696
A0A067PN33	A0A067PU48	Uncharacterized protein.	DUF1708 domain-containing protein.	0.812
A0A067PN33	A0A067PW76	Uncharacterized protein.	Profilin; Binds to actin and affects the structure of the cytoskeleton. At high concentrations, profilin prevents the polymerization of actin, whereas it enhances it at low concentrations.	0.769