STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067PZ57F-box domain-containing protein. (530 aa)    
Predicted Functional Partners:
A0A067QA91
WD_REPEATS_REGION domain-containing protein.
    
 0.698
A0A067PCD2
Uncharacterized protein.
   
 0.644
A0A067PCH7
Histone H2A; Belongs to the histone H2A family.
    
 0.639
A0A067P7D8
F-box domain-containing protein.
    
 0.622
A0A067QKH6
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.622
A0A067PPR3
Protein kinase domain-containing protein.
   
  0.595
A0A067Q7N6
B30.2/SPRY domain-containing protein.
    
 0.591
A0A067QDA7
Uncharacterized protein.
    
 0.591
A0A067Q213
Chromo domain-containing protein.
    
 0.519
A0A067QCA8
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
   
  0.483
Your Current Organism:
Jaapia argillacea
NCBI taxonomy Id: 933084
Other names: J. argillacea MUCL 33604, Jaapia argillacea MUCL 33604
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.