STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067Q1P3Vps54 domain-containing protein. (1113 aa)    
Predicted Functional Partners:
A0A067QC41
Uncharacterized protein.
    
 0.992
A0A067PZP5
Uncharacterized protein.
   
 0.985
A0A067QHL8
Thioredoxin reductase.
   
 0.978
A0A067Q761
Uncharacterized protein.
   
 0.910
A0A067PF17
t-SNARE coiled-coil homology domain-containing protein.
    
 0.898
A0A067PVI2
t-SNARE coiled-coil homology domain-containing protein.
    
 0.870
A0A067PS52
Uncharacterized protein.
   
 0.865
A0A067PUY4
Uncharacterized protein.
   
 0.865
A0A067QCD7
Uncharacterized protein.
    
 0.862
A0A067PAY0
t-SNARE coiled-coil homology domain-containing protein.
    
 0.833
Your Current Organism:
Jaapia argillacea
NCBI taxonomy Id: 933084
Other names: J. argillacea MUCL 33604, Jaapia argillacea MUCL 33604
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