STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A067QBM1TFIIB-type domain-containing protein. (354 aa)    
Predicted Functional Partners:
A0A067Q5W8
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.995
A0A067PFR6
Uncharacterized protein.
    
 0.993
A0A067Q8H6
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.992
A0A067PH73
Uncharacterized protein.
    
 0.991
A0A067QPF7
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.988
A0A067PHA4
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.987
A0A067PI45
RPOLD domain-containing protein.
    
 0.987
A0A067QEQ7
Uncharacterized protein.
   
 0.987
A0A067QEZ2
Uncharacterized protein.
   
 0.987
A0A067PWW6
Uncharacterized protein.
   
 0.986
Your Current Organism:
Jaapia argillacea
NCBI taxonomy Id: 933084
Other names: J. argillacea MUCL 33604, Jaapia argillacea MUCL 33604
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