STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ahos_2001ABC transporter related protein. (215 aa)    
Predicted Functional Partners:
Ahos_2000
Transport system permease protein.
 
 
 0.999
Ahos_1999
Periplasmic binding protein.
  
 
 0.989
Ahos_0479
Periplasmic binding protein.
  
 
 0.938
Ahos_2031
Receptor for ABC transport, TroA superfamily.
  
 
 0.938
Ahos_1782
ABC transporter related protein.
 
    0.726
Ahos_2007
Precorrin-8X methylmutase CbiC/CobH.
     
 0.676
Ahos_2189
MoaD family protein.
       0.615
rpl2
Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
  
     0.589
rpl14
Ribosomal protein L14b; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
  
     0.578
ileS
isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
 
    0.538
Your Current Organism:
Acidianus hospitalis
NCBI taxonomy Id: 933801
Other names: A. hospitalis W1, Acidianus hospitalis W1, Acidianus hospitalis str. W1, Acidianus hospitalis strain W1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.