STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C2WTK9Uncharacterized protein. (387 aa)    
Predicted Functional Partners:
A0A0C3B405
Pinin_SDK_memA domain-containing protein.
    
 0.994
A0A0C3BJX4
WD_REPEATS_REGION domain-containing protein.
   
 
 0.984
A0A0C3BPN6
RRM domain-containing protein.
   
 0.982
A0A0C3BDA3
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.930
A0A0C2XNA5
Uncharacterized protein.
   
 0.923
A0A0C3ARN4
RRM domain-containing protein.
   
 0.910
A0A0C3AKU9
Uncharacterized protein.
   
 0.863
A0A0C2WKB1
Hist_deacetyl domain-containing protein.
   
 0.814
A0A0C3AM77
Hist_deacetyl domain-containing protein.
   
 0.814
A0A0C3AN71
Hist_deacetyl domain-containing protein.
   
 0.814
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.