STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C2WUD9NACHT domain-containing protein. (183 aa)    
Predicted Functional Partners:
A0A0C3B3B8
WD_REPEATS_REGION domain-containing protein.
   
 0.809
A0A0C3BDG0
B30.2/SPRY domain-containing protein.
    
 0.808
A0A0C2WUH8
Uncharacterized protein.
    
 0.795
A0A0C2WZZ9
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.752
A0A0C3AW94
Uncharacterized protein.
    
 0.735
A0A0C2WEK5
Uncharacterized protein.
   
 0.719
A0A0C3B3J7
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.719
A0A0C2WY91
Histone H3; Belongs to the histone H3 family.
    
 0.716
A0A0C2X7I3
Histone domain-containing protein.
    
 0.716
A0A0C2XIY6
Histone H3; Belongs to the histone H3 family.
    
 0.716
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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