STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C2X7Y7Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
A0A0C3B587
Uncharacterized protein.
    
  0.791
A0A0C3BNZ5
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
    
 0.616
A0A0C2WY91
Histone H3; Belongs to the histone H3 family.
    
 0.615
A0A0C2X7I3
Histone domain-containing protein.
    
 0.615
A0A0C2XIY6
Histone H3; Belongs to the histone H3 family.
    
 0.615
A0A0C2XPN3
Fe2OG dioxygenase domain-containing protein.
    
 0.615
A0A0C3AAA3
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.601
A0A0C3A9P1
UBX domain-containing protein.
    
  0.580
A0A0C2W9F1
Zn(2)-C6 fungal-type domain-containing protein.
    
  0.547
A0A0C2X3I3
SCP domain-containing protein.
    
  0.547
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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