STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C2XBP8Eukaryotic translation initiation factor 5A. (160 aa)    
Predicted Functional Partners:
A0A0C2WV48
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.999
A0A0C3AHJ7
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.999
A0A0C3B2X7
Ribosomal_L18_c domain-containing protein.
   
 
 0.999
A0A0C3BGT6
Uncharacterized protein.
   
 
 0.999
A0A0C2XHS1
Uncharacterized protein.
   
 0.998
A0A0C3AJB3
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.998
LIA1
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor.
  
 0.997
A0A0C2WRU1
KOW domain-containing protein.
   
 
 0.996
A0A0C2W6F6
Uncharacterized protein.
  
 
 0.995
A0A0C3AU36
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.995
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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