STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C2XEW1Uncharacterized protein. (521 aa)    
Predicted Functional Partners:
A0A0C2W2T5
Uncharacterized protein.
    
 0.872
A0A0C2WW95
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.872
A0A0C3B6B2
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.872
A0A0C2WC86
Uncharacterized protein.
  
 
 0.863
A0A0C3AYH4
WD_REPEATS_REGION domain-containing protein.
   
 0.830
A0A0C2W602
Bms1-type G domain-containing protein.
   
  0.746
A0A0C2WZZ9
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.738
A0A0C2WFN6
Uncharacterized protein.
   
 0.732
A0A0C3B9U7
KH domain-containing protein.
   
  0.732
A0A0C3BB98
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
  0.728
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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