STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C2XKC5Hydrophobin. (173 aa)    
Predicted Functional Partners:
A0A0C3BAS7
Peptidase C50 domain-containing protein.
   
 
 0.773
A0A0C2XXD9
Uncharacterized protein.
   
 
 0.771
A0A0C3AQG6
WD_REPEATS_REGION domain-containing protein.
   
 
 0.699
A0A0C3B1F1
Uncharacterized protein.
   
 
 0.699
A0A0C3BNY6
WD_REPEATS_REGION domain-containing protein.
   
 
 0.699
A0A0C2X2Q7
Uncharacterized protein.
   
 
 0.652
A0A0C2W5B5
HORMA domain-containing protein.
   
 
  0.648
A0A0C2WJ59
HORMA domain-containing protein.
   
 
  0.648
A0A0C2WK13
WD_REPEATS_REGION domain-containing protein.
     
 0.625
A0A0C2XH93
Protein kinase domain-containing protein.
   
 0.609
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.