STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3AR44SAE2 domain-containing protein. (445 aa)    
Predicted Functional Partners:
A0A0C2WNL0
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
   
 0.970
A0A0C3B2L2
AAA_23 domain-containing protein.
    
 0.967
A0A0C3AB11
Uncharacterized protein.
   
 0.941
A0A0C2XXG7
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.911
A0A0C3AYK5
AAA_12 domain-containing protein.
    
 0.838
FEN1
Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...]
    
 0.835
A0A0C3BBR8
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.834
A0A0C2XRZ2
Uncharacterized protein.
   
 0.830
A0A0C3APD5
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.813
A0A0C3B9R6
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.789
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.