STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3ARQ8SH3 domain-containing protein. (345 aa)    
Predicted Functional Partners:
A0A0C3B2G8
Uncharacterized protein.
  
  
 0.982
A0A0C3AEB1
BRO1 domain-containing protein.
   
 0.966
A0A0C2X038
WH1 domain-containing protein.
    
 0.920
A0A0C3AXH8
Uncharacterized protein.
    
 0.871
A0A0C2X2H7
Uncharacterized protein.
   
 0.867
A0A0C3AG74
Ras-GEF domain-containing protein.
   
 0.867
A0A0C3AVG7
Uncharacterized protein.
   
 0.867
A0A0C3AXG5
Uncharacterized protein.
   
 0.867
A0A0C3BAI9
Uncharacterized protein.
   
 0.867
A0A0C2XYV7
Uncharacterized protein.
   
 0.829
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.