STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3AXM8Uncharacterized protein. (296 aa)    
Predicted Functional Partners:
A0A0C3AS31
Uncharacterized protein.
   
 0.844
A0A0C3B587
Uncharacterized protein.
    
 0.816
A0A0C3BRZ5
Uncharacterized protein.
    
 0.761
A0A0C2X1N6
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.746
A0A0C2X820
Uncharacterized protein.
   
 0.740
A0A0C2WRP0
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.730
A0A0C3B2X8
Uncharacterized protein.
   
  0.730
M408DRAFT_8598
Uncharacterized protein.
   
  0.730
A0A0C2X0I6
Uncharacterized protein.
   
  0.729
A0A0C2W795
Uncharacterized protein.
    
  0.727
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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