STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3B142Uncharacterized protein. (438 aa)    
Predicted Functional Partners:
A0A0C2X3N6
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.978
A0A0C3BD58
Uncharacterized protein.
   
 0.974
A0A0C3BMS3
Nuclear pore protein.
   
 0.966
A0A0C2X006
Nup54 domain-containing protein.
   
 0.962
A0A0C2XZU6
Uncharacterized protein.
   
 0.960
A0A0C3AGA6
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.951
A0A0C2WEK5
Uncharacterized protein.
   
 0.949
A0A0C3B3J7
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.949
A0A0C3ARP9
Uncharacterized protein.
   
 0.940
A0A0C3B2D3
Uncharacterized protein.
    
 0.940
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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