STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3BD86OBG-type G domain-containing protein. (365 aa)    
Predicted Functional Partners:
A0A0C3AN96
Uncharacterized protein.
   
 
 0.994
A0A0C3BDV8
Uncharacterized protein.
    
   0.992
A0A0C2WD68
RWD domain-containing protein.
   
 
 0.948
A0A0C3AJB3
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
   0.887
A0A0C3AYW0
Ribosomal_L2_C domain-containing protein.
   
 
 0.880
A0A0C3AHJ7
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
   0.878
A0A0C3ANU1
RL10P_insert domain-containing protein.
  
   0.877
A0A0C2XJC4
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
    
 
 0.854
A0A0C3B9F7
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.841
A0A0C2WV48
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.838
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
Server load: low (18%) [HD]