STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3BED9Uncharacterized protein. (403 aa)    
Predicted Functional Partners:
A0A0C3B587
Uncharacterized protein.
    
 0.816
A0A0C3AKX7
Nop domain-containing protein.
   
  0.728
A0A0C3A6Z9
Utp12 domain-containing protein.
   
 0.722
M408DRAFT_7156
DRIM domain-containing protein.
   
  0.715
A0A0C3B483
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 0.700
A0A0C2VZ35
WD_REPEATS_REGION domain-containing protein.
    
  0.699
A0A0C2WH29
Uncharacterized protein.
    
  0.699
A0A0C2X6Z7
Uncharacterized protein.
    
  0.699
A0A0C3AAV0
CBF domain-containing protein.
    
  0.699
A0A0C3B124
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
  0.699
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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