STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3BKC4Uncharacterized protein. (459 aa)    
Predicted Functional Partners:
A0A0C2XZD0
Uncharacterized protein.
   
 0.999
A0A0C3B6J3
Uncharacterized protein.
    
 0.999
A0A0C3BP27
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
  
 0.999
M408DRAFT_7640
Uncharacterized protein.
   
 0.998
A0A0C3B813
Cog4 domain-containing protein.
   
 0.998
A0A0C3BIT4
Uncharacterized protein.
    
 0.998
A0A0C3BEH5
Uncharacterized protein.
    
 0.997
A0A0C3B0W7
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.939
A0A0C2WYC8
Uncharacterized protein.
   
 0.920
A0A0C3BJL2
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.916
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.