STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3BM78Uncharacterized protein. (216 aa)    
Predicted Functional Partners:
A0A0C2W1L2
Uncharacterized protein.
   
 0.999
A0A0C2W510
Uncharacterized protein.
  
 0.999
A0A0C2W777
Ribosomal_L16 domain-containing protein.
  
 0.999
A0A0C2WLW4
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.999
A0A0C2WRU1
KOW domain-containing protein.
  
 0.999
A0A0C2WUP5
Uncharacterized protein.
  
 0.999
A0A0C2WV48
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.999
A0A0C2X4G1
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
  
 0.999
A0A0C2X9Z2
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.999
A0A0C2XAB6
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 
 0.999
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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