STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0C3BMG9F-box domain-containing protein. (262 aa)    
Predicted Functional Partners:
A0A0C2WRA9
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.809
A0A0C2WRZ3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.809
A0A0C2XCI3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.809
A0A0C3ALI2
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.809
A0A0C3B8R8
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.809
A0A0C3BN93
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
  0.693
A0A0C3BPN9
AAA domain-containing protein.
   
  0.693
A0A0C2WUH1
RING-type domain-containing protein.
    
 0.691
A0A0C3BFF9
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
  0.689
A0A0C2WRH2
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.676
Your Current Organism:
Serendipita vermifera
NCBI taxonomy Id: 933852
Other names: S. vermifera MAFF 305830, Sebacina vermifera MAFF 305830, Serendipita vermifera MAFF 305830
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.