STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEU93660.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)    
Predicted Functional Partners:
OEU93659.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OEU88628.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.691
OEU89641.1
Threonine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.550
OEU89701.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.550
atpE
ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
  0.530
OEU93661.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.452
OEU90169.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-glutamate cyclase family.
 
    0.446
OEU92224.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.404
Your Current Organism:
Streptomyces abyssalis
NCBI taxonomy Id: 933944
Other names: CCTCC AA 2010008, DSM 42024, S. abyssalis, Streptomyces abyssalis Xu et al. 2012, Streptomyces sp. YIM M 10400, YIM M 10400
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.