STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araQL-arabinose transport system permease protein AraQ. (376 aa)    
Predicted Functional Partners:
KIT18178.1
Bacterial extracellular solute-binding protein.
 
 0.991
lacF_1
Lactose transport system permease protein LacF.
 
 0.978
malK_1
Maltose/maltodextrin import ATP-binding protein MalK; Belongs to the ABC transporter superfamily.
 
 0.974
malL_1
Oligo-1,6-glucosidase 1.
 
    0.881
araP
L-arabinose transport system permease protein AraP.
 
 0.835
lacF_2
Lactose transport system permease protein LacF.
 
 0.808
ugpA_2
Sn-glycerol-3-phosphate transport system permease protein UgpA.
 
 0.802
ugpC_7
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
 0.797
lacF_3
Lactose transport system permease protein LacF.
 0.796
sugC_2
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 0.784
Your Current Organism:
Jannaschia aquimarina
NCBI taxonomy Id: 935700
Other names: CCUG 60899, J. aquimarina, Jannaschia aquimarina Park and Yoon 2012, Jannaschia sp. GSW-M26, KCTC 23555, strain GSW-M26
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