STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIT17792.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
  
    0.946
dapH
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase.
       0.866
gltB
Glutamate synthase [NADPH] large chain precursor.
  
    0.779
KIT17793.1
PAS domain protein.
       0.708
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
  
    0.629
hisN
Histidinol-phosphatase.
 
 
    0.540
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
  
 0.507
mlaE
Putative phospholipid ABC transporter permease protein MlaE.
       0.432
phoR
Alkaline phosphatase synthesis sensor protein PhoR.
       0.430
Your Current Organism:
Jannaschia aquimarina
NCBI taxonomy Id: 935700
Other names: CCUG 60899, J. aquimarina, Jannaschia aquimarina Park and Yoon 2012, Jannaschia sp. GSW-M26, KCTC 23555, strain GSW-M26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.