STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdgK_22-dehydro-3-deoxygluconokinase. (295 aa)    
Predicted Functional Partners:
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.991
eda
KHG/KDPG aldolase.
 
 
 0.966
uxaA
Altronate dehydratase.
 
  
 0.909
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.892
edd
Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
  
 0.871
xylB
Xylulose kinase.
 
 
 0.797
dgoA
2-dehydro-3-deoxy-6-phosphogalactonate aldolase.
 
 
 0.791
por
Polyol:NADP oxidoreductase.
 
  
 0.730
guaA_1
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.647
algA
Alginate biosynthesis protein AlgA; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.616
Your Current Organism:
Jannaschia aquimarina
NCBI taxonomy Id: 935700
Other names: CCUG 60899, J. aquimarina, Jannaschia aquimarina Park and Yoon 2012, Jannaschia sp. GSW-M26, KCTC 23555, strain GSW-M26
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