STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIT14233.1Rhomboid family protein. (184 aa)    
Predicted Functional Partners:
amiA
N-acetylmuramoyl-L-alanine amidase AmiA precursor.
  
   0.761
hflK_1
Modulator of FtsH protease HflK; HflC and HflK could encode or regulate a protease.
   
 0.586
hflC
Modulator of FtsH protease HflC; HflC and HflK could regulate a protease.
   
 0.586
hflK_2
Modulator of FtsH protease HflK.
   
 0.586
KIT14463.1
FtsH protease regulator HflK.
   
 0.586
ftsH_1
ATP-dependent zinc metalloprotease FtsH; Belongs to the AAA ATPase family.
     
 0.523
ftsH_2
ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
     
 0.523
KIT16169.1
5-formyltetrahydrofolate cyclo-ligase family protein; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.520
KIT14232.1
Hypothetical protein.
       0.483
Your Current Organism:
Jannaschia aquimarina
NCBI taxonomy Id: 935700
Other names: CCUG 60899, J. aquimarina, Jannaschia aquimarina Park and Yoon 2012, Jannaschia sp. GSW-M26, KCTC 23555, strain GSW-M26
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.