STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEQG_00774CK1/CK1 protein kinase; Belongs to the protein kinase superfamily. (326 aa)    
Predicted Functional Partners:
NEQG_02372
Uncharacterized protein.
    
 0.999
NEQG_02103
30S ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.999
NEQG_01832
30S ribosomal protein S7.
    
  0.999
NEQG_01834
30S ribosomal protein S14p/S29e.
    
  0.999
NEQG_01968
KH_8 domain-containing protein.
    
 0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
 0.999
NEQG_01207
Uncharacterized protein.
    
  0.999
NEQG_01281
30S ribosomal protein S10p/S20e.
    
 0.999
NEQG_01383
Atypical/RIO/RIO1 protein kinase.
    
 0.999
NEQG_01428
30S ribosomal protein S4.
    
  0.999
Your Current Organism:
Nematocida parisii
NCBI taxonomy Id: 935791
Other names: N. parisii ERTm3, Nematocida parisii ERTm3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.