STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHA1Pleckstrin homology domain containing A1. (406 aa)    
Predicted Functional Partners:
STX18
Syntaxin 18.
    
 0.894
RINT1
RAD50 interactor 1.
    
 0.889
ZW10
Zw10 kinetochore protein.
    
 0.846
NBAS
NBAS subunit of NRZ tethering complex.
    
 0.829
SEC22C
SEC22 homolog C, vesicle trafficking protein.
   
 0.768
SEC22A
SEC22 homolog A, vesicle trafficking protein.
   
 0.768
YKT6
YKT6 v-SNARE homolog.
    
 0.696
COPB2
Coatomer protein complex subunit beta 2.
    
 0.647
TBC1D7
TBC1 domain family member 7.
     
 0.638
STX5
Syntaxin 5.
    
 0.635
Your Current Organism:
Choloepus hoffmanni
NCBI taxonomy Id: 9358
Other names: C. hoffmanni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.