STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHOP00000001407annotation not available (881 aa)    
Predicted Functional Partners:
APAF1
Apoptotic peptidase activating factor 1.
   
 0.817
ENSCHOP00000010502
annotation not available
    
 0.788
ENSCHOP00000006505
annotation not available
    
 0.759
ARID4B
AT-rich interaction domain 4B.
    
 0.757
ARID4A
AT-rich interaction domain 4A.
    
 0.757
LSM10
LSM10, U7 small nuclear RNA associated.
    
 0.756
FANCM
FA complementation group M.
    
 0.734
NDUFS2
NADH:ubiquinone oxidoreductase core subunit S2.
   
  0.717
NDUFS3
NADH:ubiquinone oxidoreductase core subunit S3.
   
  0.706
SNRPE
Small nuclear ribonucleoprotein polypeptide E.
   
 0.704
Your Current Organism:
Choloepus hoffmanni
NCBI taxonomy Id: 9358
Other names: C. hoffmanni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.