STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBRM1Polybromo 1. (1658 aa)    
Predicted Functional Partners:
ARID2
AT-rich interaction domain 2.
   
 0.999
SMARCA2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2.
   
0.998
ENSCHOP00000008232
annotation not available
    
 0.998
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 0.995
SMARCD1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
    
 0.994
ENSCHOP00000001633
annotation not available
    
 0.993
BRD7
Bromodomain containing 7.
   
0.993
ENSCHOP00000012244
annotation not available
   
 0.993
PHF10
PHD finger protein 10.
    
 0.992
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.986
Your Current Organism:
Choloepus hoffmanni
NCBI taxonomy Id: 9358
Other names: C. hoffmanni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.