STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHOP00000004079annotation not available (1609 aa)    
Predicted Functional Partners:
ENSCHOP00000003610
annotation not available
  
0.880
COL4A2
Collagen type IV alpha 2 chain.
  
0.871
ITGA1
Integrin subunit alpha 1.
    
 0.774
ENSCHOP00000008743
annotation not available
  
 
0.772
LAMC2
Laminin subunit gamma 2.
   
 0.725
ITGB1
Integrin subunit beta 1.
    
 0.723
ENSCHOP00000002151
annotation not available
   
 0.722
ITGB5
Integrin subunit beta 5.
    
 0.722
ENSCHOP00000010342
annotation not available
    
 0.720
ITGB6
Integrin subunit beta 6.
    
 0.719
Your Current Organism:
Choloepus hoffmanni
NCBI taxonomy Id: 9358
Other names: C. hoffmanni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.