STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHOP00000008591annotation not available (499 aa)    
Predicted Functional Partners:
ENSCHOP00000005565
annotation not available
    
  0.845
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.526
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.515
ENSCHOP00000005306
annotation not available
    
 0.512
BARD1
BRCA1 associated RING domain 1.
    
  0.511
SUFU
SUFU negative regulator of hedgehog signaling.
    
  0.504
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.502
SPOPL
Speckle type BTB/POZ protein like.
   
  0.496
SPOP
Speckle type BTB/POZ protein.
   
  0.496
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
  0.496
Your Current Organism:
Choloepus hoffmanni
NCBI taxonomy Id: 9358
Other names: C. hoffmanni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.