STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSUN3NOP2/Sun RNA methyltransferase 3. (333 aa)    
Predicted Functional Partners:
GTPBP4
GTP binding protein 4.
   
 0.922
NIP7
Nucleolar pre-rRNA processing protein NIP7.
  
 0.921
PUM3
Pumilio RNA binding family member 3.
   
  0.920
ENSCHOP00000005691
annotation not available
   
 0.904
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 0.903
NSA2
NSA2 ribosome biogenesis factor.
   
 0.897
WDR12
WD repeat domain 12.
   
 0.896
RSL24D1
Ribosomal L24 domain containing 1.
   
 0.884
ENSCHOP00000011541
annotation not available
   
 0.882
ENSCHOP00000006901
annotation not available
   
 0.877
Your Current Organism:
Choloepus hoffmanni
NCBI taxonomy Id: 9358
Other names: C. hoffmanni
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.