STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (326 aa)    
Predicted Functional Partners:
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.999
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.999
CDC73
Cell division cycle 73.
   
 0.999
ENSCHOP00000011888
annotation not available
   
 0.999
SSRP1
Structure specific recognition protein 1.
   
 0.998
ENSCHOP00000002228
annotation not available
    
 0.996
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.993
WDR61
WD repeat domain 61.
   
 0.993
C6orf15
Chromosome 6 open reading frame 15.
   
 0.992
ENSCHOP00000003149
annotation not available
    
 0.990
Your Current Organism:
Choloepus hoffmanni
NCBI taxonomy Id: 9358
Other names: C. hoffmanni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.