STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACTN1Actinin alpha 1. (911 aa)    
Predicted Functional Partners:
VCL
Vinculin.
   
 0.990
MAGI1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
    
 0.910
ENSCHOP00000011550
annotation not available
   
 0.910
ITGB1
Integrin subunit beta 1.
   
 0.895
ENSCHOP00000010342
annotation not available
    
 0.883
ITGA1
Integrin subunit alpha 1.
     
 0.881
ENSCHOP00000002151
annotation not available
    
 0.876
ITGB5
Integrin subunit beta 5.
    
 0.875
ITGB6
Integrin subunit beta 6.
    
 0.875
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
   
 0.868
Your Current Organism:
Choloepus hoffmanni
NCBI taxonomy Id: 9358
Other names: C. hoffmanni
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.