STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG29373.1Putative rhamnosyl transferase. (274 aa)    
Predicted Functional Partners:
SMG37369.1
SseB protein N-terminal domain-containing protein.
  
     0.719
SMG10781.1
Hypothetical protein.
  
     0.700
SMG08563.1
Protein of unknown function.
  
     0.664
SMG52308.1
HTH DNA binding domain-containing protein.
  
     0.661
SMG48534.1
Hypothetical protein.
  
     0.658
SMG08484.1
Hypothetical protein.
  
     0.632
SMG06672.1
Hypothetical protein.
  
     0.621
SMG24483.1
Cell division and transport-associated protein TolA.
  
     0.607
SMG50128.1
Hypothetical protein.
  
     0.597
SMG39391.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
     0.584
Your Current Organism:
Paracoccus sp. J56
NCBI taxonomy Id: 935850
Other names: P. sp. J56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.