STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519005_02027Unannotated protein. (323 aa)    
Predicted Functional Partners:
GCA_000519005_03204
Unannotated protein.
  
 
 0.873
GCA_000519005_03201
Unannotated protein.
  
 
 0.833
GCA_000519005_02429
Unannotated protein.
  
  
 
0.750
GCA_000519005_00056
Unannotated protein.
    
  0.736
GCA_000519005_00393
Unannotated protein.
  
  
 
0.733
GCA_000519005_00044
Unannotated protein.
    
  0.731
GCA_000519005_04080
Unannotated protein.
  
 
  0.696
GCA_000519005_02792
Unannotated protein.
  
 
  0.695
GCA_000519005_00597
Unannotated protein.
    
  0.672
GCA_000519005_01261
Unannotated protein.
    
  0.650
Your Current Organism:
Nocardioides sp. J54
NCBI taxonomy Id: 935866
Other names: N. sp. J54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.