STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519005_02443Unannotated protein. (620 aa)    
Predicted Functional Partners:
GCA_000519005_02131
Unannotated protein.
    
  0.821
GCA_000519005_02444
Unannotated protein.
   
   0.787
GCA_000519005_02325
Unannotated protein.
    
  0.753
GCA_000519005_03393
Unannotated protein.
    
  0.753
GCA_000519005_03204
Unannotated protein.
    
 0.694
GCA_000519005_00114
Unannotated protein.
    
  0.683
GCA_000519005_00385
Unannotated protein.
    
  0.683
GCA_000519005_00518
Unannotated protein.
    
  0.683
GCA_000519005_00528
Unannotated protein.
    
  0.683
GCA_000519005_00530
Unannotated protein.
    
  0.683
Your Current Organism:
Nocardioides sp. J54
NCBI taxonomy Id: 935866
Other names: N. sp. J54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.