STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519265_00941Unannotated protein. (482 aa)    
Predicted Functional Partners:
GCA_000519265_01935
Unannotated protein.
 
    0.786
GCA_000519265_01333
Unannotated protein.
  
     0.763
GCA_000519265_03162
Unannotated protein.
  
     0.753
GCA_000519265_03200
Unannotated protein.
  
     0.747
GCA_000519265_01343
Unannotated protein.
  
     0.745
GCA_000519265_02131
Unannotated protein.
  
     0.744
GCA_000519265_01937
Unannotated protein.
  
    0.730
GCA_000519265_00826
Unannotated protein.
  
     0.729
GCA_000519265_02749
Unannotated protein.
  
     0.719
GCA_000519265_01901
Unannotated protein.
  
     0.718
Your Current Organism:
Desulfonatronum lacustre
NCBI taxonomy Id: 935942
Other names: D. lacustre DSM 10312, Desulfonatronum lacustre DSM 10312, Desulfonatronum lacustre Z-7951, Desulfonatronum lacustre str. DSM 10312, Desulfonatronum lacustre strain DSM 10312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.