STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000519265_02532Unannotated protein. (505 aa)    
Predicted Functional Partners:
GCA_000519265_01178
Unannotated protein.
  
 0.917
GCA_000519265_01227
Unannotated protein.
  
 0.914
GCA_000519265_01554
Unannotated protein.
 
  
 0.864
GCA_000519265_01228
Unannotated protein.
  
 0.856
GCA_000519265_01570
Unannotated protein.
  
 0.856
GCA_000519265_02764
Unannotated protein.
  
 0.803
GCA_000519265_00341
Unannotated protein.
  
 0.778
GCA_000519265_01499
Unannotated protein.
  
 0.778
GCA_000519265_01575
Unannotated protein.
  
 0.778
GCA_000519265_01578
Unannotated protein.
  
 0.778
Your Current Organism:
Desulfonatronum lacustre
NCBI taxonomy Id: 935942
Other names: D. lacustre DSM 10312, Desulfonatronum lacustre DSM 10312, Desulfonatronum lacustre Z-7951, Desulfonatronum lacustre str. DSM 10312, Desulfonatronum lacustre strain DSM 10312
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.